Starting server via command line wipes INI's?

Starting my server via the command line is wiping my configurations.
Also, i installed the server using steam CMD
I dont see anything wrong here. But maybe someone else will
echo "Starting AA:PG server.."
"C:\AAPGServer\AAPG\Binaries\Win32\AAGame.exe" server BDX_Checkout_EX /GLOBAL /AuthServerUserName=**** /AuthServerPassword=**** /AuthServerIP=192.223.24.181 /STEAMSERVERIP=192.223.24.181 MULTIHOME=192.223.24.181 /NOPAUSE /NOHOMEDIR /CONFIGSUBDIR=AAHostAServerConfig0 /SGSP=7778 /INST=1
exit
Also, i installed the server using steam CMD
I dont see anything wrong here. But maybe someone else will
2016 Flank Gaming Network Season 1 Champion
2016 FraggedNation Season 4 Champion
2015 FraggedNation Season 2 Main Champion
2015 ESL Test Cup Second place
2014 FraggedNation UMM Tournament Champion
2014 FraggedNation Old School map Tournament Champion
2014 TWL Season 1 Second Place
2013 TWL 7v7 Beta Tournament Champion
2013 TWL 5v5 Beta Tournament Second Place
2016 FraggedNation Season 4 Champion
2015 FraggedNation Season 2 Main Champion
2015 ESL Test Cup Second place
2014 FraggedNation UMM Tournament Champion
2014 FraggedNation Old School map Tournament Champion
2014 TWL Season 1 Second Place
2013 TWL 7v7 Beta Tournament Champion
2013 TWL 5v5 Beta Tournament Second Place
Comments
This worked! thank you.
2016 FraggedNation Season 4 Champion
2015 FraggedNation Season 2 Main Champion
2015 ESL Test Cup Second place
2014 FraggedNation UMM Tournament Champion
2014 FraggedNation Old School map Tournament Champion
2014 TWL Season 1 Second Place
2013 TWL 7v7 Beta Tournament Champion
2013 TWL 5v5 Beta Tournament Second Place